Run a docker singularity image

Question

How do I run a docker singularity image?

Answer 1

It's very similar to running a docker image. Use the following command:

singularity run \
        -B /Users/You/local_bids_data:/bids_dataset \
        -B /Users/You/some_folder:/outputs \
        -B /tmp:/scratch \
        fcpindi_c-pac_latest-{date}-{hash value}.img /bids_dataset /outputs participant